BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035E03LP1|AL430058
(960 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1578 1270 0.0
>3x_Contig1578
Length = 13178
Score = 1270 bits (640), Expect = 0.0
Identities = 647/648 (99%), Gaps = 1/648 (0%)
Strand = Plus / Plus
Query: 1 gatctctttacccccagaagttctgctctgaaaatcacacaggcatgtacacaatcattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12526 gatctctttacccccagaagttctgctctgaaaatcacacaggcatgtacacaatcattg 12585
Query: 61 gcatcggtagcaacattctgcaccgcgaaaaaggctgcgacatgtttctgtaagaacgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12586 gcatcggtagcaacattctgcaccgcgaaaaaggctgcgacatgtttctgtaagaacgtt 12645
Query: 121 gattatgcggggtcatacttttactgcgtcttccaacacatagaagatgactcgactaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12646 gattatgcggggtcatacttttactgcgtcttccaacacatagaagatgactcgactaaa 12705
Query: 181 aaagagttcatgaacactgtgaatcagacatgcaatggttacagtgaaaagaagatcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12706 aaagagttcatgaacactgtgaatcagacatgcaatggttacagtgaaaagaagatcctt 12765
Query: 241 gccgtatacgaaaacgctacgtctcatttggtaaaggtaagtgacgtcccacactttaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12766 gccgtatacgaaaacgctacgtctcatttggtaaaggtaagtgacgtcccacactttaac 12825
Query: 301 aaatcggttccaatctcgttccctgtgtattacagtgaaaagttctataataattactac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12826 aaatcggttccaatctcgttccctgtgtattacagtgaaaagttctataataattactac 12885
Query: 361 gataccatggaaaacttttataatagttaccatcactcattttattacggggcagttcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12886 gataccatggaaaacttttataatagttaccatcactcattttattacggggcagttcta 12945
Query: 421 tcagcatatttcccagttatatttttctttggtggtcttatccattggttgaaagtgttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12946 tcagcatatttcccagttatatttttctttggtggtcttatccattggttgaaagtgttc 13005
Query: 481 ttcccacagaaaactaactcagttagaagagctatgaaaaaggtatggattgttagagtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13006 ttcccacagaaaactaactcagttagaagagctatgaaaaaggtatggattgttagagtg 13065
Query: 541 ttcgaaaagcatgttaccattccctctctgtttaacgg-aacgcatgctgctcctgagcc 599
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 13066 ttcgaaaagcatgttaccattccctctctgtttaacggaaacgcatgctgctcctgagcc 13125
Query: 600 agtaactggtggacactatccgacaaggttgcagtcaatatttataac 647
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13126 agtaactggtggacactatccgacaaggttgcagtcaatatttataac 13173
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6179
Number of Sequences: 1807
Number of extensions: 6179
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 960
length of database: 10,358,551
effective HSP length: 16
effective length of query: 944
effective length of database: 10,329,639
effective search space: 9751179216
effective search space used: 9751179216
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)